| Issue Date | Title | Author(s) |
| 2022 | ENNGene : an Easy Neural Network model building tool for Genomics | Chalupová, Eliška; Vaculík, Ondřej; Poláček, Jakub; Jozefov, Filip; Majtner, Tomáš; Alexiou, Panagiotis |
| 2022 | Fine-tuning transformers for genomic tasks | Martinek, Vlastimil; Cechak, David; Gresova, Katarina; Alexiou, Panagiotis; Simecek, Petr |
| 2008 | Genomic and epigenetic alterations deregulate microRNA expression in human epithelial ovarian cancer | Zhang, Lin; Volinia, Stefano; Bonome, Tomas; Calin, George Adrian; Greshock, Joel; Yang, Nuo; Liu, Chang-Gong; Giannakakis, Antonis; Alexiou, Pangiotis; Hasegawa, Kosei; Johnstone, Cameron N.; Megraw, Molly S.; Adams, Sarah; Lassus, Heini; Huang, Jia; Kaur, Sippy; Liang, Shun; Sethupathy, Praveen; Leminen, Arto; Simossis, Victor A.; Sandaltzopoulos, Raphael; Naomoto, Yoshio; Katsaros, Dionyssios; Gimotty, Phyllis A.; DeMichele, Angela; Huang, Qihong; Bützow, Ralf; Rustgi, Anil K; Weber, Barbara L.; Birrer, Michael J.; Hatzigeorgiou, Artemis G.; Croce, Carlo M.; Coukos, George |
| 2023 | Genomic benchmarks : a collection of datasets for genomic sequence classification | Grešová, Katarína; Martinek, Vlastimil; Čechák, David; Šimeček, Petr; Alexiou, Panagiotis |
| 2015 | Identification of cancer predisposition variants in apparently healthy individuals using a next-generation sequencing-based family genomics approach | Karageorgos, Ioannis; Mizzi, Clint; Giannopoulou, Efstathia; Pavlidis, Cristiana; Peters, Brock A.; Zagoriti, Zoi; Stenson, Peter D.; Mitropoulos, Konstantinos; Borg, Joseph J.; Kalofonos, Haralabos P.; Drmanac, Radoje; Stubbs, Andrew; Spek, Peter van der; Cooper, David N.; Katsila, Theodora; Patrinos, George P. |
| 2014 | Key challenges for next‐generation pharmacogenomics | Kampourakis, Kostas; Vayena, Effy; Mitropoulou, Christina; Schaik, Ron H.; Cooper, David N.; Borg, Joseph J.; Patrinos, George P. |
| 2019 | Leukocyte transcriptional signatures dependent on LPS dosage in human endotoxemia | Khan, Hina N.; Perlee, Desirée; Schoenmaker, Lieke; Meer, Anne-Jan van der; Franitza, Marek; Toliat, Mohammad Reza; Nürnberg, Peter; Zwinderman, Aeilko H.; Poll, Tom van der; Scicluna, Brendon P. |
| 2016 | Novel genetic risk variants for pediatric celiac disease | Balasopoulou, Angeliki; Stanković, Biljana; Panagiotara, Angeliki; Nikčevic, Gordana; Peters, Brock A.; John, Anne; Mendrinou, Effrosyni; Stratopoulos, Apostolos; Legaki, Aigli Ioanna; Stathakopoulou, Vasiliki; Tsolia, Aristoniki; Govaris, Nikolaos; Govari, Sofia; Zagoriti, Zoi; Poulas, Konstantinos; Kanariou, Maria; Constantinidou, Nikki; Krini, Maro; Spanou, Kleopatra; Radlovic, Nedeljko; Ali, Bassam R.; Borg, Joseph J.; Drmanac, Radoje; Chrousos, George; Pavlovic, Sonja; Roma, Eleftheria; Zukic, Branka; Patrinos, George P.; Katsila, Theodora |
| 2020 | PENGUINN : precise exploration of nuclear G-quadruplexes using interpretable neural networks | Klimentova, Eva; Polacek, Jakub; Simecek, Petr; Alexiou, Panagiotis |
